ARCHS4

Ma'ayan Lab

What is ARCHS4?

ARCHS4 is a browser extension designed to enrich RNA-seq datasets available on the Gene Expression Omnibus (GEO). By adding this extension, users can access links to download relevant files containing aligned reads mapped to genes with counts. Moreover, it provides a heatmap visualization summary of the expression data from the processed samples using Clustergrammer.

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Extension stats

By: maayanlabapps

View on Chrome Web Store

Users: 791 ▼ -10

Rating: 5.00 (7)

Version: 1.0.1 (Last updated: 2017-07-28)

Creation date: 2017-07-27

Risk impact: Low risk impact

Risk likelihood: Low risk likelihood

Manifest version: 2

Permissions:

http://amp.pharm.mssm.edu/awsscheduler/getGSEmatrix.php*

Size: 46.77K

Email: ma*****@gmail.com

Ranking

# 34424 ▼ 309

Other rankings

#26384 in Workflow & Planning ▼ 33

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Extension summary

Analyze keywords

All RNA-seq and CHIP-seq Sample Search Space (ARCHS4) is a browser extension that adds content to the landing pages of RNA-seq datasets available on the Gene Expression Omnibus (GEO). The extension adds links to download files that contain the aligned reads mapped to genes with counts, as well as a heatmap visualization summary of the expression data from the processed samples using Clustergrammer.