Open data resources in the biomedical domain

FAIR-biomed promo image
What is FAIR-biomed?

FAIR-biomed is a Chrome extension that brings open biomedical data directly to specific research situations. With a simple highlight and click, access gene information, related publications, mouse phenotypes, and pathways from various resources.

By: fair.ext
Users: 231 ▲ 2
Rating: 5.00 (2)
Version: 0.2.3 (Last updated: 2022-06-21)
Creation date: 2020-06-17
Risk impact: Low risk impact
Risk likelihood: Very low risk likelihood
Manifest version: 3
  • storage
  • contextMenus
Size: 916.48K
Stats date:

Chrome-Stats Rank

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#1256 in Tools ▼ 15

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Not available on Firefox
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Vasts amounts of biomedical data are stored in open databases and knowledge-bases. Data in these resources are intended to be findable, accessible, interoperable, and reusable (FAIR). However, integrating relevant parts within a specific project can be a challenge. FAIR-biomed works inside the browser to bring open data directly to specific research situations.

On any page in the browser, highlight some text. Press Ctr+Shift+Z or open a context menu (right-click) and select FAIR-biomed. A new box should appear prompting you to choose a data source to query.

Starting from a gene name, for example, you can fetch a general summary from NCBI Gene, related publications from PubMed or Europe PMC, mouse phenotypes from the International Mouse Phenotyping Consortium, or pathways from Reactome. The extension provides links to 20+ resources.

User reviews
Such a useful app, quickly finding information about a variant or gene without having to switch to countless sites to do the search saves valuable time. Highly recommended to anyone working in genomics.
by Stephane Bourgeois Stephane Bourgeois, 2020-06-25

A super handy app to access biomedical info from open-data resources such as UniProt, PubMed, Reactome, JASPAR etc in single click.
by Aziz Khan Aziz Khan, 2019-10-31
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Risk impact

FAIR-biomed is relatively safe to use as it requires very minimum permissions.

Risk likelihood

FAIR-biomed has earned a good reputation and can be trusted.

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Promo images
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