Microbial Clinical Atlas

Microbial Clinical Atlas (MCA) is a free, offline clinical microbiology reference for clinicians and researchers. Browse curated taxon passports covering taxonomy, biology, ecology, metabolites, clinical associations, and evidence-graded literature.

A. PASSPORTS • Search and browse 60+ curated microbial taxon passports • Detailed clinical profiles: pathobiont status, AMR highlights, virulence factors, bloom triggers, and more • Evidence-graded clinical associations linked to PubMed • Bookmark taxa for quick access

B. ADVANCED SEARCH • Search KEGG pathways, taxa, and diseases from a unified search bar • Explore pathway–taxon–disease relationships with cross-navigation • View linked compounds, drugs, and co-occurring taxa

C. ON-DEVICE AI EXTRACTOR (OPTIONAL) • Scan papers you find interesting and suggest them to our curation team • Runs entirely on your device with Gemma 4 by Google • Nothing leaves your phone unless you tap Send in Mail • Requires an iPhone 15 Pro or newer

D. PRIVACY-FIRST • All data is stored offline on your device • No account required, no tracking, no analytics

Developed and maintained by the Bioinformatics Hub (https://TheBioHub.ca/).